Royce,
I don't measure the entire length each time and I never would assume to get .0002 down the length of a wooden shaft. My pin concentricity is between .0002 and zero indicated.
The 60 degree center is put on the concentric pin driver after I adjust and indicate it to zero in the chuck.
I hold the shaft at about .910 in the buck chuck and rear chuck and put a precision face on the joint and then drill and tap to a very tight fit where I must use a chuck in my hand holding the device and holding the shaft in the other hand to crank it out. This is done after finishing and before final tweaking of the stepped minor. The threads have already been stepped drilled a little but not to a final cue fit. To remove the device I hold a small chuck in my hand so I can get more purchase than just holding a cue dia. This allows me to unscrew the device after the shaft is sprayed, wet sanded and buffed.
The precision face that was put on at About .910 never gets faced again because the device guarantees the 90 degree face angle to the centerline of the threads and x axis of the of the shaft.
The shaft taper is cut on this x axis on the very tight threaded insert pin interface. The tapered contour of the shaft is concentric to the device and the threaded shaft insert from .900 to .850. I never test roll my shafts as the device does not come out until after finishing. The roll is always true on the table and there is never an elevation change at the joint when rolled on the rail.
I have been using this method since 2004 and over the years have refined the process. In 2010 I shared this method with the forum and since that time have made a few changes. The post below speaks of facing after the fact and fixed tail stock spring loading. I now have and adjustable tail stock with the spring loading also and can dial in the exact and smallest pressure between centers everytime. Along with my gravity feed follow rest I am creating shafts at a level of quality that I could never have imagined in 2010.
Here is a thread detailing my method that has been improved since 2010 but will outline the procedure as such:
http://forums.azbilliards.com/showthread.php?t=199595
Rick